BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H06SP1|AL425198
(1042 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig540 1039 0.0
3x_Contig214 890 0.0
3x_Contig1109 171 2e-42
>3x_Contig540
Length = 1644
Score = 1039 bits (522), Expect = 0.0
Identities = 547/557 (98%), Gaps = 1/557 (0%)
Strand = Plus / Plus
Query: 487 cagataactcatatttaacattaacatttatagactgtaaatagtaaaacaaaagtcttg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagataactcatatttaacattaacatttatagactgtaaatagtaaaacaaaagtcttg 60
Query: 547 tgcttgaagcgcatgcanatcatcagcagagaaaggcttaatattaggctttgttaaaca 606
|||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tgcttgaagcgcatgcgaatcatcagcagagaaaggcttaatattaggctatgttaaaca 120
Query: 607 tgagtattaaatctggatttgaaaaaaaaagtaaaaagtaatgaaggatgcgaggktsga 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 121 tgagtattaaatctggatttgaaaaaaaaagtaaaaagtaatgaaggatgcgaggttcga 180
Query: 667 actcgcgcggacaattgtccaacagatcttaagtctgccgccttagaccactcggccaac 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actcgcgcggacaattgtccaacagatcttaagtctgccgccttagaccactcggccaac 240
Query: 727 cctccaatctttatgaaaaagtaaattttttccatttatactgcatagaaatttaagcac 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctccaatctttatgaaaaagtaaattttttccatttatactgcatagaaatttaagcac 300
Query: 787 agcttagaagcgtcaattcgtttatattagaattaaaaccataaacaccaaaaacaaaat 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcttagaagcgtcaattcgtttatattagaattaaaaccataaacaccaaaaacaaaat 360
Query: 847 cgtgaacgtagaataatgttgctttcacgagtggatatctagaacattccaccatcaaaa 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtgaacgtagaataatgttgctttcacgagtggatatctagaacattccaccatcaaaa 420
Query: 907 gtcggtgactttgtggattctttttggctcaaaatgcagaggcttttaacagtgaaraaa 966
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 gtcggtgactttgtggattctttttggctcaaaatgcagaggcttttaacagtgaagaaa 480
Query: 967 tgccttagaatcttaaaattgtcatttgaactcagctcagctcatcaccattattgagca 1026
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 481 tgccttagaatcttaaaattgtcatttgaactcagctcagctcatcaacattattgaaca 540
Query: 1027 c-rcagtgaattgaatc 1042
| ||||||||||||||
Sbjct: 541 cagcagtgaattgaatc 557
>3x_Contig214
Length = 1381
Score = 890 bits (447), Expect = 0.0
Identities = 471/477 (98%), Gaps = 3/477 (0%)
Strand = Plus / Plus
Query: 1 gggcatttgtacacccatcatctttdttgttttcagcaagtaattctgtaccggcagaag 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 887 gggcatttgtacacccatcatctttgttgttttcagcaagtaattctgtaccggcagaag 946
Query: 61 cacaaagcattgaatcaattratgacatttcgtccaagaagaagagcaaatccaaaaatt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 947 cacaaagcattgaatcaattgatgacatttcgtccaagaagaagagcaaatccaaaaatt 1006
Query: 121 ctttaaaggctccattcgtggtatataatggcaaaaragatacaggaaagttgtatctca 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1007 ctttaaaggctccattcgtggtatataatggcaaaagagatacaggaaagttgtatctca 1066
Query: 181 ctggtataactcctacttctgcaattgctgtcttacttttcggtgggtctttatcataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 ctggtataactcctacttctgcaattgctgtcttacttttcggtgggtctttatcataca 1126
Query: 241 atcttaacagttctcttaactcaccaaatgttgttgtagataattggtctccgattcgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 atcttaacagttctcttaactcaccaaatgttgttgtagataattggtctccgattcgta 1186
Query: 301 tctggtgcaaaaatggtgttctaatcaaagaattaaggtcacttgtagatgaagtcat-t 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1187 tctggtgcaaaaatggtgttctaatcaaagaattaaggtcacttgtagatgaagtcatat 1246
Query: 360 aaagaaaaacttgagaacccacattacgtcaaggcggactattctaccaagggcgatgac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 aaagaaaaacttgagaacccacattacgtcaaggcggactattctaccaagggcgatgac 1306
Query: 420 gttctc-aaaattgtggagcagattgtcaagtcgaaatagaaggaacactcacttga 475
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1307 gttctcaaaaattgtggagcagattgtcaagtcgaaatagaa-gaacactcacttga 1362
>3x_Contig1109
Length = 3474
Score = 171 bits (86), Expect = 2e-42
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 639 aaaaagtaatgaaggatgcgaggktsgaactcgcgcggacaattgtccaacagatcttaa 698
||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||
Sbjct: 329 aaaaagtaatgaaggatgcgaggttcgaactcgcgcggacaatcgtccaacagatcttaa 388
Query: 699 gtctgccgccttagaccactcggccaaccctcca 732
||||||||||||||||||||||||||||||||||
Sbjct: 389 gtctgccgccttagaccactcggccaaccctcca 422
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8407
Number of Sequences: 1807
Number of extensions: 8407
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 3
length of query: 1042
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1026
effective length of database: 10,329,639
effective search space: 10598209614
effective search space used: 10598209614
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)